General information about the entry |
Entry location: | UTR |
Position: | chrX:41208369-41208591  |
Length: | 223 nt |
Sequence: | DDX3X_Sherlock.fasta |
Overlapping gene: | DDX3X |
Paralogs: | chr10:118782918-118783138 chr4:104496602-104496832 chr8:26922360-26922582 chrX:73364448-73364667 chrY:15031382-15031597
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Ultraconserved Genomic Regulatory Block (UGRB): |
DDX3X_cluster: chrX:41091773-41379583  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | uc.471 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr1:115610050-115610269        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chrX:13292912-13293134   Identity: 99.55%
   E-value: 4.3e-40   Bit-score: 170.1 |
This UCNE has 3 paralogous regions in Mouse
Paralog #1:   chr6:102937095-102937317   Identity: 97.76%
   E-value: 1.7e-38   Bit-score: 164.8 |
Paralog #2:   chr1:27994377-27994561   Identity: 89.36%
   E-value: 3.2e-24   Bit-score: 117.4 |
Paralog #3:   chrY:1261832-1262043   Identity: 84.16%
   E-value: 6.8e-23   Bit-score: 113 |
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Armadillo (dasNov1): | Region #1:   scaffold_28058:2372-2594   Identity: 100%
   E-value: 2.7e-33   Bit-score: 147.7 |
Region #2:   scaffold_103535:4331-4553   Identity: 98.65%
   E-value: 3.6e-32   Bit-score: 144 |
Region #3:   scaffold_78270:8580-8786   Identity: 87.2%
   E-value: 3.3e-20   Bit-score: 104.3 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_37047:12436-12536   Identity: 86.27%
   E-value: 0.000019   Bit-score: 55.2 |
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Opossum (monDom5): | Region #1:   chr4:22332746-22332968   Identity: 99.1%
   E-value: 7.3e-34   Bit-score: 149.9 |
This UCNE has 2 paralogous regions in Opossum
Paralog #1:   chr3:41649946-41650166   Identity: 92.31%
   E-value: 9e-28   Bit-score: 129.6 |
Paralog #2:   chr2:301385284-301385445   Identity: 74.14%
   E-value: 0.000000021   Bit-score: 65.3 |
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Platypus (ornAna1): | Region #1:   Ultra222:6703135-6703358   Identity: 98.66%
   E-value: 1.3e-42   Bit-score: 178.1 |
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Zebra_finch (taeGut1): | Region #1:   chr1:6610581-6610800   Identity: 95.56%
   E-value: 9e-38   Bit-score: 161.3 |
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Lizard (anoCar2): | Region #1:   chr3:134123392-134123605   Identity: 91.44%
   E-value: 3.2e-34   Bit-score: 150 |
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Painted_turtle (chrPic1): | Region #1:   JH584730:640017-640239   Identity: 96.89%
   E-value: 4.5e-39   Bit-score: 166.7 |
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Xenopus (xenTro3): | Region #1:   GL172671:940104-940312   Identity: 86.67%
   E-value: 2.4e-25   Bit-score: 120.3 |
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Fugu (fr2): | Region #1:   chrUn:153916371-153916562   Identity: 66.18%
   E-value: 0.0000000033   Bit-score: 61.3 |
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Medaka (oryLat2): | Region #1:   chr21:13978217-13978396   Identity: 68.62%
   E-value: 0.0000000015   Bit-score: 62.5 |
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Stickleback (gasAcu1): | Region #1:   chrXVI:16088960-16089144   Identity: 68.88%
   E-value: 0.0000000000064   Bit-score: 70.5 |
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Tetraodon (tetNig2): | This UCNE has 1 paralogous region in Tetraodon
Paralog #1:   chr2:8838940-8839140   Identity: 64.9%
   E-value: 0.0000000013   Bit-score: 62.6 |
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Zebrafish (danRer7): | Region #1:   chr9:34386887-34387067   Identity: 73.06%
   E-value: 0.000000002   Bit-score: 63 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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