General information about the entry |
Entry location: | UTR |
Position: | chrX:41208660-41209003  |
Length: | 344 nt |
Sequence: | DDX3X_Theodore.fasta |
Overlapping gene: | DDX3X |
Paralogs: | chr10:118782509-118782849 chr2:55333956-55334186 chr4:104496901-104497230 chr8:26921949-26922291 chrX:73364727-73365061 chrX:74898535-74898712 chrY:15031657-15031989: chrY_Theodore;
|
Ultraconserved Genomic Regulatory Block (UGRB): |
DDX3X_cluster: chrX:41091773-41379583  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr1:115609645-115609988        Identity: >95%
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chrX:13293203-13293543   Identity: 98.26%
   E-value: 1.8e-55   Bit-score: 221.8 |
This UCNE has 3 paralogous regions in Mouse
Paralog #1:   chr6:102936686-102937026   Identity: 96.51%
   E-value: 2.4e-53   Bit-score: 214.8 |
Paralog #2:   chr1:27994594-27994927   Identity: 90.7%
   E-value: 2.3e-45   Bit-score: 188.3 |
Paralog #3:   chrY:1261273-1261549   Identity: 78.72%
   E-value: 3.6e-23   Bit-score: 114.6 |
|
|
Armadillo (dasNov1): | Region #1:   scaffold_103535:4624-4985   Identity: 92.84%
   E-value: 2.9e-45   Bit-score: 188.1 |
Region #2:   scaffold_78270:8897-9237   Identity: 85.22%
   E-value: 1.1e-33   Bit-score: 149.6 |
Region #3:   scaffold_28058:1855-2303   Identity: 73.85%
   E-value: 6.9e-30   Bit-score: 137 |
Region #4:   scaffold_114064:3336-3592   Identity: 84.73%
   E-value: 3e-22   Bit-score: 111.7 |
Region #5:   scaffold_99696:3757-3933   Identity: 80.34%
   E-value: 0.00000000011   Bit-score: 73.2 |
Region #6:   scaffold_37047:12615-12755   Identity: 77.84%
   E-value: 0.00000085   Bit-score: 60.3 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_14778:38521-38694   Identity: 83.8%
   E-value: 0.0000000000062   Bit-score: 77.4 |
|
|
Opossum (monDom5): | Region #1:   chr4:22332335-22332677   Identity: 99.13%
   E-value: 2.5e-49   Bit-score: 201.9 |
This UCNE has 2 paralogous regions in Opossum
Paralog #1:   chr2:301382764-301383052   Identity: 83.22%
   E-value: 2.7e-26   Bit-score: 125.3 |
Paralog #2:   chr3:41650271-41650480   Identity: 94.76%
   E-value: 3.8e-24   Bit-score: 118.2 |
|
|
Platypus (ornAna1): | Region #1:   Ultra222:6702723-6703066   Identity: 99.13%
   E-value: 1.4e-62   Bit-score: 245 |
|
Zebra_finch (taeGut1): | Region #1:   chr1:6610175-6610519   Identity: 97.97%
   E-value: 9.6e-56   Bit-score: 221.6 |
|
Lizard (anoCar2): | Region #1:   chr3:134123668-134124008   Identity: 95.95%
   E-value: 1e-61   Bit-score: 242 |
|
Painted_turtle (chrPic1): | Region #1:   JH584730:640301-640643   Identity: 98.26%
   E-value: 2.6e-53   Bit-score: 214.6 |
This UCNE has 2 paralogous regions in Painted_turtle
Paralog #1:   JH584684:3995318-3995548   Identity: 70.76%
   E-value: 0.000000000092   Bit-score: 73.3 |
Paralog #2:   JH584422:8946083-8946276   Identity: 69.35%
   E-value: 0.000012   Bit-score: 56.2 |
|
|
Xenopus (xenTro3): | Region #1:   GL172671:939703-940033   Identity: 92.58%
   E-value: 2.7e-45   Bit-score: 187.2 |
|
Fugu (fr2): | Region #1:   chrUn:153916021-153916283   Identity: 84.62%
   E-value: 1.2e-37   Bit-score: 156.5 |
Region #2:   chrUn:83142978-83143260   Identity: 72.51%
   E-value: 1.7e-22   Bit-score: 106.1 |
|
Medaka (oryLat2): | Region #1:   chr21:13978493-13978765   Identity: 86.48%
   E-value: 4.7e-34   Bit-score: 144.6 |
|
Stickleback (gasAcu1): | Region #1:   chrXVI:16089232-16089523   Identity: 84.67%
   E-value: 1.7e-38   Bit-score: 159.5 |
Region #2:   chrI:21963176-21963455   Identity: 75.35%
   E-value: 6.4e-23   Bit-score: 107.7 |
|
Tetraodon (tetNig2): | Region #1:   chr2:8838584-8838846   Identity: 80.66%
   E-value: 2e-33   Bit-score: 142.4 |
Region #2:   chr3:6517372-6517605   Identity: 74.38%
   E-value: 1.1e-19   Bit-score: 96.7 |
|
Zebrafish (danRer7): | Region #1:   chr9:34387145-34387450   Identity: 83.28%
   E-value: 1.1e-25   Bit-score: 117.6 |
Region #2:   chr6:59575774-59576043   Identity: 82.87%
   E-value: 5e-22   Bit-score: 105.5 |
|
Lamprey (petMar1): |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|