General information about the entry |
Entry location: | intergenic |
Position: | chrX:136317153-136317665  |
Length: | 513 nt |
Sequence: | ZIC3_Beatrice.fasta |
Upstream gene: | GPR101 |
Downstream gene: | ZIC3 |
Paralogs: | chr13:100395407-100395604
|
Ultraconserved Genomic Regulatory Block (UGRB): |
ZIC3_cluster: chrX:136317153-137065062  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | hs755; |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr4:4486868-4487379        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr1:148601756-148601973   Identity: 66.82%
   E-value: 0.00000000000066   Bit-score: 79.7 |
|
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chrX:57709462-57709974   Identity: 97.66%
   E-value: 4.4e-133   Bit-score: 480.3 |
|
Armadillo (dasNov1): | Region #1:   scaffold_7021:85841-86351   Identity: 98.04%
   E-value: 2.4e-122   Bit-score: 444.7 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_1885:19718-19915   Identity: 67%
   E-value: 0.000000000093   Bit-score: 74.1 |
|
|
Opossum (monDom5): | Region #1:   chrX:43514893-43515409   Identity: 91.3%
   E-value: 1.3e-107   Bit-score: 396.1 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr7:97917250-97917470   Identity: 65.77%
   E-value: 0.000000000029   Bit-score: 76 |
|
|
Platypus (ornAna1): | Region #1:   chr6:7228500-7229010   Identity: 96.48%
   E-value: 6.2e-124   Bit-score: 449.4 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   chr10:10919588-10919782   Identity: 67.51%
   E-value: 0.0000000000061   Bit-score: 77.4 |
|
|
Zebra_finch (taeGut1): | Region #1:   chr4A:215193-215715   Identity: 92.56%
   E-value: 2.8e-115   Bit-score: 420 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr1:39601152-39601349   Identity: 66.5%
   E-value: 0.000000000047   Bit-score: 73.8 |
|
|
Lizard (anoCar2): | Region #1:   chrUn_GL343562:427672-428085   Identity: 75.17%
   E-value: 8.9e-51   Bit-score: 206.2 |
|
Painted_turtle (chrPic1): | Region #1:   JH584720:1256409-1256918   Identity: 95.9%
   E-value: 9.6e-121   Bit-score: 439.2 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584757:1351215-1351432   Identity: 66.36%
   E-value: 0.0000000000024   Bit-score: 79.1 |
|
|
Xenopus (xenTro3): | Region #1:   GL172667:2021901-2022409   Identity: 88.13%
   E-value: 6e-94   Bit-score: 349.4 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL172897:1073809-1074033   Identity: 65.2%
   E-value: 0.000000000043   Bit-score: 74.2 |
|
|
Fugu (fr2): | Region #1:   chrUn:202562230-202562652   Identity: 73.24%
   E-value: 3.9e-57   Bit-score: 221.7 |
|
Medaka (oryLat2): | Region #1:   chr10:6673583-6674006   Identity: 71.66%
   E-value: 7.7e-50   Bit-score: 197.6 |
|
Stickleback (gasAcu1): | Region #1:   chrIV:5990511-5990936   Identity: 72.49%
   E-value: 1e-53   Bit-score: 210.6 |
|
Tetraodon (tetNig2): | Region #1:   chr1:8925456-8925878   Identity: 72.6%
   E-value: 1.8e-52   Bit-score: 206.3 |
|
Zebrafish (danRer7): | Region #1:   chr14:32979624-32980059   Identity: 66.44%
   E-value: 2.3e-35   Bit-score: 150.4 |
This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr9:32246276-32246488   Identity: 62.33%
   E-value: 0.0000000025   Bit-score: 63.9 |
|
|
Lamprey (petMar1): |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|