General information about the entry |
Entry location: | intergenic |
Position: | chrX:136353629-136353907  |
Length: | 279 nt |
Sequence: | ZIC3_Frederica.fasta |
Upstream gene: | GPR101 |
Downstream gene: | ZIC3 |
Paralogs: | chr13:100506670-100506832
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Ultraconserved Genomic Regulatory Block (UGRB): |
ZIC3_cluster: chrX:136317153-137065062  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr4:4494965-4495243        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chrX:57766576-57766855   Identity: 98.93%
   E-value: 1.4e-68   Bit-score: 265.1 |
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Armadillo (dasNov1): |
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Opossum (monDom5): | Region #1:   chrX:43538355-43538633   Identity: 96.06%
   E-value: 2.5e-62   Bit-score: 244.8 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr7:97759504-97759686   Identity: 60.66%
   E-value: 0.00006   Bit-score: 54.2 |
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Platypus (ornAna1): | Region #1:   chr6:7207006-7207284   Identity: 95.71%
   E-value: 3.8e-62   Bit-score: 243.3 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   chr10:10969102-10969287   Identity: 62.37%
   E-value: 0.00000015   Bit-score: 61.9 |
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Zebra_finch (taeGut1): |
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Lizard (anoCar2): | This UCNE has 1 paralogous region in Lizard
Paralog #1:   chr3:99126797-99126978   Identity: 60.85%
   E-value: 0.000014   Bit-score: 55.2 |
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Painted_turtle (chrPic1): | Region #1:   JH584720:1221298-1221576   Identity: 96.42%
   E-value: 1.2e-62   Bit-score: 245.4 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584757:1277940-1278124   Identity: 62.16%
   E-value: 0.0000008   Bit-score: 59.9 |
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Xenopus (xenTro3): | Region #1:   GL172667:2034970-2035187   Identity: 73.39%
   E-value: 1.1e-20   Bit-score: 105.1 |
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Fugu (fr2): | This UCNE has 1 paralogous region in Fugu
Paralog #1:   chrUn:81755935-81756061   Identity: 62.99%
   E-value: 0.0000092   Bit-score: 50.2 |
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Medaka (oryLat2): | Region #1:   chr10:6682595-6682783   Identity: 68.59%
   E-value: 0.00000000000028   Bit-score: 75.3 |
This UCNE has 1 paralogous region in Medaka
Paralog #1:   chr21:9293006-9293126   Identity: 64.46%
   E-value: 0.000015   Bit-score: 49.6 |
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Stickleback (gasAcu1): | Region #1:   chrIV:5997968-5998155   Identity: 69.47%
   E-value: 0.000000000000002   Bit-score: 82.5 |
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Tetraodon (tetNig2): | Region #1:   chr1:8932092-8932279   Identity: 69.47%
   E-value: 2.2e-16   Bit-score: 85.5 |
This UCNE has 1 paralogous region in Tetraodon
Paralog #1:   chr2:10175625-10175773   Identity: 61.07%
   E-value: 0.00000096   Bit-score: 53.5 |
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Zebrafish (danRer7): | Region #1:   chr14:32960479-32960666   Identity: 67.2%
   E-value: 0.000000000011   Bit-score: 70.8 |
This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr9:32255312-32255440   Identity: 63.57%
   E-value: 0.000077   Bit-score: 48.1 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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