General information about the entry |
Entry location: | intergenic |
Position: | chr1:38724158-38724374  |
Length: | 217 nt |
Sequence: | POU3F1_Olivia.fasta |
Upstream gene: | POU3F1 |
Downstream gene: | RRAGC |
Paralogs: | chr6:98828469-98828634: POU3F2_Olivia;
|
Ultraconserved Genomic Regulatory Block (UGRB): |
POU3F1_cluster: chr1:38561073-39152174  |
External links: |
CONDOR database: | CRCNE00007840; CRCNE00007791; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr23:3658872-3659088        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr3:74633998-74634197   Identity: 67.66%
   E-value: 0.0000000000045   Bit-score: 75.7 |
|
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr4:124465353-124465567   Identity: 97.21%
   E-value: 1.3e-51   Bit-score: 208.4 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr4:23150019-23150235   Identity: 65.45%
   E-value: 0.0000000000024   Bit-score: 77.9 |
|
|
Armadillo (dasNov1): | Region #1:   scaffold_19756:21528-21743   Identity: 100%
   E-value: 6.3e-53   Bit-score: 212.9 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_2643:34723-34920   Identity: 69.35%
   E-value: 0.0000000000008   Bit-score: 79.7 |
|
|
Opossum (monDom5): | Region #1:   chr4:422030825-422031039   Identity: 96.76%
   E-value: 4.6e-50   Bit-score: 203.6 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr2:359826246-359826447   Identity: 69.76%
   E-value: 0.000000000000025   Bit-score: 84.9 |
|
|
Platypus (ornAna1): | Region #1:   Ultra472:1890044-1890258   Identity: 97.21%
   E-value: 8.9e-51   Bit-score: 205.1 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Ultra483:2227371-2227572   Identity: 68.78%
   E-value: 0.00000000000015   Bit-score: 81.4 |
|
|
Zebra_finch (taeGut1): | Region #1:   chr23:4505568-4505782   Identity: 96.28%
   E-value: 7e-49   Bit-score: 198.2 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr3:74263745-74263962   Identity: 66.67%
   E-value: 0.0000000000012   Bit-score: 77.8 |
|
|
Lizard (anoCar2): | Region #1:   chrUn_GL343426:690882-691096   Identity: 96.28%
   E-value: 2.7e-50   Bit-score: 203.4 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chr1:172568365-172568567   Identity: 69.12%
   E-value: 0.00000000000036   Bit-score: 80.1 |
|
|
Painted_turtle (chrPic1): | Region #1:   JH585014:43730-43944   Identity: 98.14%
   E-value: 5.4e-50   Bit-score: 202.9 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584721:1011081-1011301   Identity: 66.67%
   E-value: 0.0000000000015   Bit-score: 78.5 |
|
|
Xenopus (xenTro3): | Region #1:   GL173058:566731-566918   Identity: 89.36%
   E-value: 3.7e-30   Bit-score: 136.3 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL172751:400505-400677   Identity: 65.71%
   E-value: 0.00000061   Bit-score: 59.1 |
|
|
Fugu (fr2): | Region #1:   chrUn:89130474-89130632   Identity: 80.12%
   E-value: 4.1e-24   Bit-score: 110.8 |
|
Medaka (oryLat2): | Region #1:   chr16:21174560-21174698   Identity: 85.11%
   E-value: 1e-22   Bit-score: 106.3 |
|
Stickleback (gasAcu1): | Region #1:   chrXX:17077853-17077991   Identity: 83.69%
   E-value: 1.9e-22   Bit-score: 105.4 |
|
Tetraodon (tetNig2): |
|
Zebrafish (danRer7): | Region #1:   chr16:35743744-35743883   Identity: 82.98%
   E-value: 2.1e-19   Bit-score: 96.1 |
|
Lamprey (petMar1): |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|