General information about the entry |
Entry location: | intergenic |
Position: | chr1:63463350-63463876  |
Length: | 527 nt |
Sequence: | FOXD3_Joshua.fasta |
Upstream gene: | ATG4C |
Downstream gene: | FOXD3 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
FOXD3_cluster: chr1:63342300-63915007  |
External links: |
CONDOR database: | CRCNE00000329; CRCNE00000394; CRCNE00000330; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr8:28457429-28457953        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr4:99373227-99373740   Identity: 95.73%
   E-value: 3.5e-111   Bit-score: 407.5 |
|
Armadillo (dasNov1): | Region #1:   scaffold_16813:41196-41722   Identity: 98.86%
   E-value: 1.3e-114   Bit-score: 419.1 |
|
Opossum (monDom5): | Region #1:   chr2:28367340-28367861   Identity: 89.29%
   E-value: 4.2e-94   Bit-score: 351.2 |
|
Platypus (ornAna1): | Region #1:   Contig219:1062243-1062768   Identity: 94.69%
   E-value: 1.8e-116   Bit-score: 424.6 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Contig18645:6574-6809   Identity: 78.06%
   E-value: 1.2e-26   Bit-score: 126.3 |
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|
Zebra_finch (taeGut1): | Region #1:   chr8:25648923-25649447   Identity: 95.45%
   E-value: 3.9e-111   Bit-score: 406.3 |
|
Lizard (anoCar2): | Region #1:   chr4:99585699-99586223   Identity: 93.36%
   E-value: 5.7e-110   Bit-score: 402.9 |
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Painted_turtle (chrPic1): | Region #1:   JH584487:2056439-2056946   Identity: 96.27%
   E-value: 2.6e-106   Bit-score: 391.3 |
|
Xenopus (xenTro3): | Region #1:   GL172640:5166252-5166774   Identity: 88.95%
   E-value: 3.8e-93   Bit-score: 346.8 |
|
Fugu (fr2): | Region #1:   chrUn:120638955-120639377   Identity: 72.25%
   E-value: 6e-51   Bit-score: 201.2 |
|
Medaka (oryLat2): | Region #1:   chr4:17271960-17272315   Identity: 82.68%
   E-value: 4e-59   Bit-score: 228.5 |
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Stickleback (gasAcu1): | Region #1:   chrVIII:7622273-7622669   Identity: 81.5%
   E-value: 1.3e-65   Bit-score: 250.2 |
|
Tetraodon (tetNig2): | Region #1:   chr1:20592603-20593051   Identity: 74.12%
   E-value: 1.8e-54   Bit-score: 212.9 |
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Zebrafish (danRer7): | Region #1:   chr6:31915213-31915615   Identity: 81.33%
   E-value: 1.6e-56   Bit-score: 220.7 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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