General information about the entry |
Entry location: | intergenic |
Position: | chr1:63539050-63539265  |
Length: | 216 nt |
Sequence: | FOXD3_Norma.fasta |
Upstream gene: | ATG4C |
Downstream gene: | FOXD3 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
FOXD3_cluster: chr1:63342300-63915007  |
External links: |
CONDOR database: | CRCNE00000340; CRCNE00000341; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr8:28482270-28482484        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr4:99444839-99445054   Identity: 95.37%
   E-value: 6e-49   Bit-score: 199.5 |
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Armadillo (dasNov1): |
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Opossum (monDom5): | Region #1:   chr2:28288399-28288613   Identity: 91.16%
   E-value: 5.1e-42   Bit-score: 176.9 |
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Platypus (ornAna1): | Region #1:   Contig219:1023347-1023561   Identity: 94.88%
   E-value: 1.4e-47   Bit-score: 194.5 |
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Zebra_finch (taeGut1): | Region #1:   chr8:25675434-25675645   Identity: 93.4%
   E-value: 1.2e-45   Bit-score: 187.4 |
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Lizard (anoCar2): | Region #1:   chr4:99542730-99542947   Identity: 92.2%
   E-value: 5e-46   Bit-score: 189.2 |
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Painted_turtle (chrPic1): | Region #1:   JH584487:2112690-2112904   Identity: 97.21%
   E-value: 2.3e-49   Bit-score: 200.8 |
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Xenopus (xenTro3): | Region #1:   GL172640:5191997-5192211   Identity: 89.77%
   E-value: 1.5e-39   Bit-score: 167.5 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL174247:35084-35298   Identity: 89.77%
   E-value: 1.5e-39   Bit-score: 167.5 |
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Fugu (fr2): | Region #1:   chrUn:120651331-120651512   Identity: 59.89%
   E-value: 0.00000001   Bit-score: 59.6 |
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Medaka (oryLat2): | Region #1:   chr4:17251708-17251898   Identity: 63.35%
   E-value: 0.00000000000053   Bit-score: 74 |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): | Region #1:   chr1:20580758-20580939   Identity: 62.09%
   E-value: 0.000000000038   Bit-score: 67.7 |
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Zebrafish (danRer7): | Region #1:   chr6:31885149-31885325   Identity: 67.78%
   E-value: 0.0000000001   Bit-score: 67.2 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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