UCNE: FOXD3_Scarlett
(id = 4090)

General information about the entry
Entry location:intergenic
Position:chr1:63600129-63600431
Length:303 nt
Sequence:FOXD3_Scarlett.fasta
Upstream gene:ATG4C
Downstream gene:FOXD3
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): FOXD3_cluster: chr1:63342300-63915007
External links:
CONDOR database:CRCNE00000353; CRCNE00000354;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr8:28516456-28516758        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr4:99502540-99502830   Identity: 82.75%    E-value: 4.5e-44   Bit-score: 183.8

Armadillo (dasNov1):
Region #1:   scaffold_25255:5446-5748   Identity: 98.35%    E-value: 9e-61   Bit-score: 239.4

Opossum (monDom5):
Region #1:   chr2:28172494-28172802   Identity: 81.35%    E-value: 6.6e-39   Bit-score: 167.1

Platypus (ornAna1):
Region #1:   Contig219:956500-956819   Identity: 85.94%    E-value: 2.5e-50   Bit-score: 204.1

Zebra_finch (taeGut1):
Region #1:   chr8:25706875-25707178   Identity: 95.72%    E-value: 3.1e-59   Bit-score: 233.1
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr4:99480876-99481239   Identity: 71.98%    E-value: 2.5e-36   Bit-score: 157.5

Painted_turtle (chrPic1):
Region #1:   JH584487:2159681-2159987   Identity: 94.46%    E-value: 3.3e-56   Bit-score: 224.1

Xenopus (xenTro3):
Region #1:   GL172640:5224050-5224339   Identity: 77.3%    E-value: 1.5e-33   Bit-score: 148

Fugu (fr2):
Region #1:   chrUn:120674648-120675015   Identity: 60%    E-value: 0.0000000000000021   Bit-score: 82.3

Medaka (oryLat2):
Region #1:   chr4:17208194-17208337   Identity: 78.08%    E-value: 0.00000000000024   Bit-score: 75.6

Stickleback (gasAcu1):
Region #1:   chrVIII:7672660-7672812   Identity: 73.08%    E-value: 0.000000000027   Bit-score: 68.9

Tetraodon (tetNig2):
Region #1:   chr1:20559489-20559843   Identity: 62.46%    E-value: 4.3e-19   Bit-score: 94.6

Zebrafish (danRer7):
Region #1:   chr6:31828802-31829149   Identity: 67.43%    E-value: 5.5e-21   Bit-score: 101.9

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):