General information about the entry |
Entry location: | intergenic |
Position: | chr1:63608448-63608707  |
Length: | 260 nt |
Sequence: | FOXD3_Scout.fasta |
Upstream gene: | ATG4C |
Downstream gene: | FOXD3 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
FOXD3_cluster: chr1:63342300-63915007  |
External links: |
CONDOR database: | CRCNE00000357; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr8:28520929-28521189        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr4:99512799-99513058   Identity: 96.15%
   E-value: 3.5e-38   Bit-score: 164 |
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Armadillo (dasNov1): |
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Opossum (monDom5): | Region #1:   chr2:28167600-28167859   Identity: 95.38%
   E-value: 1.6e-32   Bit-score: 145.7 |
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Platypus (ornAna1): | Region #1:   Contig219:944435-944694   Identity: 95%
   E-value: 2.3e-39   Bit-score: 167.5 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Contig49599:693-952   Identity: 95%
   E-value: 2.1e-39   Bit-score: 167.6 |
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Zebra_finch (taeGut1): | Region #1:   chr8:25711974-25712235   Identity: 96.18%
   E-value: 1.1e-40   Bit-score: 171.3 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chrUn:19910561-19910822   Identity: 96.18%
   E-value: 1.1e-40   Bit-score: 171.3 |
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Lizard (anoCar2): | Region #1:   chr4:99468038-99468290   Identity: 94.86%
   E-value: 1.9e-33   Bit-score: 147.7 |
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Painted_turtle (chrPic1): | Region #1:   JH584487:2166495-2166755   Identity: 97.32%
   E-value: 1.1e-40   Bit-score: 172.2 |
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Xenopus (xenTro3): | Region #1:   GL172640:5228421-5228679   Identity: 93.05%
   E-value: 1.3e-33   Bit-score: 148 |
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Fugu (fr2): | Region #1:   chrUn:120676971-120677128   Identity: 68.12%
   E-value: 0.000000091   Bit-score: 56.7 |
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Medaka (oryLat2): |
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Stickleback (gasAcu1): | Region #1:   chrVIII:7674868-7675025   Identity: 69.38%
   E-value: 0.000000048   Bit-score: 57.9 |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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