General information about the entry |
Entry location: | intron |
Position: | chr10:131693998-131694422  |
Length: | 425 nt |
Sequence: | EBF3_Scheherazade.fasta |
Overlapping gene: | EBF3 |
Paralogs: | chr5:158356492-158356769
|
Ultraconserved Genomic Regulatory Block (UGRB): |
EBF3_cluster: chr10:129964273-131958079  |
External links: |
CONDOR database: | CRCNE00003774; CRCNE00003773; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr6:36220404-36220829        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr13:10852005-10852205   Identity: 68.37%
   E-value: 0.0000000056   Bit-score: 66.4 |
|
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr7:137252807-137253230   Identity: 97.18%
   E-value: 1.9e-82   Bit-score: 311.7 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr11:44785053-44785344   Identity: 64.53%
   E-value: 0.000000000006   Bit-score: 77.6 |
|
|
Armadillo (dasNov1): | Region #1:   scaffold_46441:3048-3449   Identity: 96.52%
   E-value: 2.6e-67   Bit-score: 261.7 |
|
Opossum (monDom5): | Region #1:   chrUn:25038739-25039146   Identity: 94.13%
   E-value: 3.7e-65   Bit-score: 254.8 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr1:354222338-354222558   Identity: 68.75%
   E-value: 0.000000014   Bit-score: 66.8 |
|
|
Platypus (ornAna1): | Region #1:   Ultra350:126072-126494   Identity: 94.81%
   E-value: 5.5e-79   Bit-score: 299.8 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   chrX1:23409001-23409318   Identity: 61.19%
   E-value: 0.00000000012   Bit-score: 72.8 |
|
|
Zebra_finch (taeGut1): | Region #1:   chr6:35222051-35222475   Identity: 97.65%
   E-value: 3.8e-81   Bit-score: 306.4 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr13:4137675-4137922   Identity: 63.46%
   E-value: 0.000000023   Bit-score: 64.6 |
|
|
Lizard (anoCar2): | Region #1:   chr3:55836315-55836741   Identity: 97.2%
   E-value: 3.4e-91   Bit-score: 340.2 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chrUn_GL343205:3882026-3882213   Identity: 68.78%
   E-value: 0.00000001   Bit-score: 66.3 |
|
|
Painted_turtle (chrPic1): | This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584705:556548-556791   Identity: 65.89%
   E-value: 0.0000000027   Bit-score: 68.7 |
|
|
Xenopus (xenTro3): | Region #1:   GL172668:1366068-1366484   Identity: 95.71%
   E-value: 2.4e-75   Bit-score: 287.3 |
|
Fugu (fr2): | Region #1:   chrUn:147736224-147736675   Identity: 77.02%
   E-value: 1.5e-62   Bit-score: 239.4 |
Region #2:   chrUn:170287082-170287193   Identity: 67.86%
   E-value: 0.000053   Bit-score: 48.3 |
|
Medaka (oryLat2): | Region #1:   chr15:18875612-18876040   Identity: 77.19%
   E-value: 1e-54   Bit-score: 213.5 |
|
Stickleback (gasAcu1): | Region #1:   chrVI:11277798-11278184   Identity: 80.36%
   E-value: 5.7e-57   Bit-score: 221.1 |
This UCNE has 1 paralogous region in Stickleback
Paralog #1:   chrIV:14122673-14122784   Identity: 69.64%
   E-value: 0.000015   Bit-score: 50.3 |
|
|
Tetraodon (tetNig2): | Region #1:   chr17:7233703-7234147   Identity: 76.84%
   E-value: 2.4e-59   Bit-score: 228.8 |
|
Zebrafish (danRer7): | Region #1:   chr12:44225124-44225530   Identity: 82.97%
   E-value: 3.1e-51   Bit-score: 202.8 |
This UCNE has 2 paralogous regions in Zebrafish
Paralog #1:   chr14:36282436-36282585   Identity: 69.33%
   E-value: 0.0000043   Bit-score: 52.9 |
Paralog #2:   chr21:32855755-32856045   Identity: 61.59%
   E-value: 0.000031   Bit-score: 50 |
|
|
Lamprey (petMar1): | Region #1:   Contig11357:13099-13308   Identity: 68.54%
   E-value: 0.00000000042   Bit-score: 70 |
Region #2:   Contig14985:7321-7571   Identity: 65.35%
   E-value: 0.0000000034   Bit-score: 66.9 |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|