General information about the entry |
Entry location: | intron |
Position: | chr10:131750878-131751222  |
Length: | 345 nt |
Sequence: | EBF3_Virginia.fasta |
Overlapping gene: | EBF3 |
Paralogs: | chr5:158486787-158486931: EBF1_Virginia; chr8:25872325-25872611: EBF2_Virginia;
|
Ultraconserved Genomic Regulatory Block (UGRB): |
EBF3_cluster: chr10:129964273-131958079  |
External links: |
CONDOR database: | CRCNE00003748; CRCNE00003747; CRCNE00003746; CRCNE00003745; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr6:36264024-36264368        Identity: >95%This UCNE has 2 paralogous regions in Chicken
Paralog #1:   chr13:10777097-10777241   Identity: 74.48%
   E-value: 0.00000000091   Bit-score: 68.7 |
Paralog #2:   chr22:636431-636753   Identity: 60.82%
   E-value: 0.0000000023   Bit-score: 67.4 |
|
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr7:137302816-137303157   Identity: 97.08%
   E-value: 7.4e-73   Bit-score: 279.6 |
This UCNE has 2 paralogous regions in Mouse
Paralog #1:   chr11:44657066-44657210   Identity: 75.17%
   E-value: 0.00000000097   Bit-score: 69.9 |
Paralog #2:   chr14:67266988-67267273   Identity: 61.44%
   E-value: 0.0000019   Bit-score: 59 |
|
|
Armadillo (dasNov1): | Region #1:   scaffold_41115:608-952   Identity: 97.1%
   E-value: 1.1e-64   Bit-score: 252.6 |
This UCNE has 2 paralogous regions in Armadillo
Paralog #1:   scaffold_47:54686-54830   Identity: 74.48%
   E-value: 0.00000012   Bit-score: 63.2 |
Paralog #2:   scaffold_18654:5569-5855   Identity: 61.11%
   E-value: 0.00003   Bit-score: 55.2 |
|
|
Opossum (monDom5): | This UCNE has 2 paralogous regions in Opossum
Paralog #1:   chr1:354357759-354357903   Identity: 74.48%
   E-value: 0.00000012   Bit-score: 63.4 |
Paralog #2:   chr1:736446583-736446869   Identity: 62.75%
   E-value: 0.00000029   Bit-score: 62.2 |
|
|
Platypus (ornAna1): | Region #1:   Ultra350:30560-30903   Identity: 92.46%
   E-value: 1.2e-70   Bit-score: 271.9 |
This UCNE has 2 paralogous regions in Platypus
Paralog #1:   chrX1:23311946-23312090   Identity: 73.79%
   E-value: 0.00000000036   Bit-score: 70.9 |
Paralog #2:   Contig15153:5247-5533   Identity: 61.76%
   E-value: 0.0000000094   Bit-score: 66.2 |
|
|
Zebra_finch (taeGut1): | Region #1:   chr6:35264735-35265078   Identity: 96.8%
   E-value: 4.5e-75   Bit-score: 285.9 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chr13:4053447-4053591   Identity: 74.48%
   E-value: 0.00000000065   Bit-score: 69.4 |
Paralog #2:   chr22:1532016-1532338   Identity: 60.82%
   E-value: 0.0000000017   Bit-score: 68 |
|
|
Lizard (anoCar2): | Region #1:   chr3:55915049-55915392   Identity: 96.51%
   E-value: 4.9e-77   Bit-score: 292.9 |
This UCNE has 2 paralogous regions in Lizard
Paralog #1:   chrUn_GL343205:4014980-4015124   Identity: 75.17%
   E-value: 0.00000000014   Bit-score: 72.2 |
Paralog #2:   chrUn_GL343422:838892-839215   Identity: 61.11%
   E-value: 0.00000000037   Bit-score: 70.7 |
|
|
Painted_turtle (chrPic1): | This UCNE has 2 paralogous regions in Painted_turtle
Paralog #1:   JH584705:443306-443450   Identity: 75.17%
   E-value: 0.00000000054   Bit-score: 70.7 |
Paralog #2:   JH584489:4134191-4134513   Identity: 60.53%
   E-value: 0.000000012   Bit-score: 66.3 |
|
|
Xenopus (xenTro3): | Region #1:   GL172668:1324388-1324714   Identity: 87.77%
   E-value: 1.5e-51   Bit-score: 208 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL173144:215646-215847   Identity: 65.52%
   E-value: 0.000000066   Bit-score: 63 |
|
|
Fugu (fr2): | Region #1:   chrUn:147754818-147755071   Identity: 65.13%
   E-value: 0.000000000000026   Bit-score: 78.9 |
|
Medaka (oryLat2): | Region #1:   chr15:18895564-18895821   Identity: 67.42%
   E-value: 8.3e-16   Bit-score: 84 |
|
Stickleback (gasAcu1): | Region #1:   chrVI:11259512-11259768   Identity: 66.29%
   E-value: 0.0000000000000013   Bit-score: 83.4 |
|
Tetraodon (tetNig2): | Region #1:   chr17:7215010-7215266   Identity: 62.26%
   E-value: 0.000000000044   Bit-score: 68.2 |
|
Zebrafish (danRer7): | Region #1:   chr12:44272530-44272736   Identity: 65.44%
   E-value: 0.000000036   Bit-score: 59.5 |
This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr14:36221851-36221999   Identity: 71.81%
   E-value: 0.0000000033   Bit-score: 62.9 |
|
|
Lamprey (petMar1): |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|