UCNE: LMO1_Logan
(id = 8276)

General information about the entry
Entry location:intergenic
Position:chr11:8304630-8305004
Length:375 nt
Sequence:LMO1_Logan.fasta
Upstream gene:LMO1
Downstream gene:STK33
Paralogs:chr12:16941557-16941887: LMO3_Logan;
Ultraconserved Genomic Regulatory Block (UGRB): LMO1_cluster: chr11:8199373-8318138
External links:
CONDOR database:CRCNE00006396;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):uc.319 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr5:11050824-11051198        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr7:109191298-109191672   Identity: 99.73%    E-value: 8e-88   Bit-score: 329.4
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_12857:7099-7472   Identity: 99.47%    E-value: 4e-82   Bit-score: 310.7

Opossum (monDom5):
Region #1:   chr5:247611875-247612247   Identity: 98.66%    E-value: 9.2e-84   Bit-score: 316.4
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Contig20321:2116-2489   Identity: 97.86%    E-value: 5.5e-84   Bit-score: 316.2
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr5:9689947-9690319   Identity: 97.86%    E-value: 1e-83   Bit-score: 314.7
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343294:1086333-1086707   Identity: 97.07%    E-value: 1e-89   Bit-score: 335.2
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584901:1058494-1058866   Identity: 97.86%    E-value: 3.9e-81   Bit-score: 307.2

Xenopus (xenTro3):
Region #1:   GL173541:248630-248999   Identity: 89.42%    E-value: 3.4e-63   Bit-score: 246.8

Fugu (fr2):
Region #1:   chrUn:45934636-45935002   Identity: 94.28%    E-value: 6.3e-94   Bit-score: 343.5

Medaka (oryLat2):
Region #1:   chr3:18031766-18032131   Identity: 92.64%    E-value: 2.1e-81   Bit-score: 302
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrII:9880750-9881115   Identity: 94.54%    E-value: 2e-91   Bit-score: 335.4
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr5:6627985-6628351   Identity: 94.28%    E-value: 8.4e-93   Bit-score: 339.8

Zebrafish (danRer7):
Region #1:   chr7:29489970-29490337   Identity: 94.84%    E-value: 2.9e-74   Bit-score: 279.2
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
This UCNE has 1 paralogous region in Lamprey

Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):