UCNE: LMO1_Sebastian
(id = 8280)

General information about the entry
Entry location:intergenic
Position:chr11:8317824-8318138
Length:315 nt
Sequence:LMO1_Sebastian.fasta
Upstream gene:LMO1
Downstream gene:STK33
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): LMO1_cluster: chr11:8199373-8318138
External links:
CONDOR database:CRCNE00011241;
VISTA Enhancer Browser:hs333;
UCE (Bejerano et al. 2004):uc.320 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr5:11021749-11022069        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr7:109202933-109203250   Identity: 98.74%    E-value: 9.1e-55   Bit-score: 219.4

Armadillo (dasNov1):
Opossum (monDom5):
Region #1:   chr5:247635959-247636276   Identity: 94.65%    E-value: 5.7e-43   Bit-score: 180.6

Platypus (ornAna1):
Region #1:   Ultra276:80487-80807   Identity: 95.33%    E-value: 1.8e-54   Bit-score: 218

Zebra_finch (taeGut1):
Region #1:   chr5:9660245-9660565   Identity: 95.33%    E-value: 1.6e-52   Bit-score: 210.8

Lizard (anoCar2):
Region #1:   chrUn_GL343294:1144397-1144716   Identity: 94.38%    E-value: 7.9e-58   Bit-score: 229

Painted_turtle (chrPic1):
Region #1:   JH584901:1108568-1108888   Identity: 95.02%    E-value: 8e-51   Bit-score: 206.2

Xenopus (xenTro3):
Region #1:   GL173541:237031-237304   Identity: 74.64%    E-value: 3.7e-22   Bit-score: 110.2
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:45940875-45941138   Identity: 70.7%    E-value: 5.1e-22   Bit-score: 104.4

Medaka (oryLat2):
Stickleback (gasAcu1):
Region #1:   chrII:9886573-9886896   Identity: 69.85%    E-value: 2.4e-28   Bit-score: 125.6

Tetraodon (tetNig2):
Region #1:   chr5:6622076-6622341   Identity: 70%    E-value: 1.6e-21   Bit-score: 102.7

Zebrafish (danRer7):
Region #1:   chr7:29501859-29502176   Identity: 81.13%    E-value: 6.5e-34   Bit-score: 144.9

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):