UCNE: SOX6_Mateo
(id = 8495)

General information about the entry
Entry location:UTR
Position:chr11:16424390-16425089
Length:700 nt
Sequence:SOX6_Mateo.fasta
Overlapping gene:SOX6
Paralogs:chr12:24168064-24168519: SOX5_Mateo;
Ultraconserved Genomic Regulatory Block (UGRB): SOX6_cluster: chr11:15389475-16621980
External links:
CONDOR database:CRCNE00002250; CRCNE00002249; CRCNE00002248;
VISTA Enhancer Browser:hs1301;
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr5:12429938-12430637        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr7:115865847-115866551   Identity: 96.89%    E-value: 7.8e-179   Bit-score: 632.7
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_8916:28946-29191   Identity: 94.53%    E-value: 4.1e-44   Bit-score: 185.3
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr5:245088738-245089448   Identity: 95.08%    E-value: 1.1e-153   Bit-score: 549.6
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra270:952973-953671   Identity: 98.57%    E-value: 9.9e-173   Bit-score: 611.9
This UCNE has 2 paralogous regions in Platypus

Zebra_finch (taeGut1):
Region #1:   chr5:11072359-11073056   Identity: 95.14%    E-value: 1.5e-159   Bit-score: 567.5
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr1:66094028-66094722   Identity: 94.44%    E-value: 4.5e-169   Bit-score: 599.6
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584746:225451-226145   Identity: 96.29%    E-value: 2.5e-162   Bit-score: 577.8
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL173441:93708-94228   Identity: 77.3%    E-value: 6.6e-65   Bit-score: 253.4
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:7079936-7080560   Identity: 65.63%    E-value: 6.7e-56   Bit-score: 218.1
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr3:17583272-17583861   Identity: 71.29%    E-value: 2.1e-66   Bit-score: 253.1
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrII:9536875-9537535   Identity: 67.94%    E-value: 8.7e-65   Bit-score: 247.8
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr5:6928749-6929349   Identity: 66.3%    E-value: 4.9e-53   Bit-score: 208.6
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr7:28422458-28423074   Identity: 71.31%    E-value: 9.1e-63   Bit-score: 241.8
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):