UCNE: SOX5_Jan
(id = 9716)

General information about the entry
Entry location:intron
Position:chr12:23855918-23856375
Length:458 nt
Sequence:SOX5_Jan.fasta
Overlapping gene:SOX5
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX5_cluster: chr12:22920003-24691414
External links:
CONDOR database:CRCNE00010389; CRCNE00010388;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr1:68218510-68218994        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr6:143995012-143995467   Identity: 96.07%    E-value: 4.3e-97   Bit-score: 360.5

Armadillo (dasNov1):
Region #1:   scaffold_12:53613-54070   Identity: 99.78%    E-value: 7.4e-98   Bit-score: 363.2

Opossum (monDom5):
Region #1:   chr8:95208261-95208724   Identity: 97.84%    E-value: 3e-94   Bit-score: 351.5

Platypus (ornAna1):
Region #1:   Ultra90:192880-193329   Identity: 98%    E-value: 4.8e-100   Bit-score: 369.9

Zebra_finch (taeGut1):
Region #1:   chr1A:60449315-60449805   Identity: 90.43%    E-value: 3.3e-89   Bit-score: 333.2

Lizard (anoCar2):
Region #1:   chr5:7330730-7331197   Identity: 90.81%    E-value: 9.3e-92   Bit-score: 342.2

Painted_turtle (chrPic1):
Xenopus (xenTro3):
Region #1:   GL173761:185945-186380   Identity: 71.92%    E-value: 3.3e-41   Bit-score: 174

Fugu (fr2):
Region #1:   chrUn:280920529-280920876   Identity: 70.54%    E-value: 1.4e-35   Bit-score: 149.9

Medaka (oryLat2):
Region #1:   chr23:459518-459862   Identity: 73.14%    E-value: 4.5e-37   Bit-score: 155.1

Stickleback (gasAcu1):
Tetraodon (tetNig2):
Region #1:   chr19:6128988-6129345   Identity: 70.99%    E-value: 2.3e-37   Bit-score: 155.9

Zebrafish (danRer7):
Region #1:   chr4:16079549-16079886   Identity: 75.44%    E-value: 2.3e-39   Bit-score: 163.5

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):