UCNE: SOX5_Mateo
(id = 9739)

General information about the entry
Entry location:UTR
Position:chr12:24168059-24168568
Length:510 nt
Sequence:SOX5_Mateo.fasta
Overlapping gene:SOX5
Paralogs:chr11:16424466-16424925: SOX6_Mateo;
Ultraconserved Genomic Regulatory Block (UGRB): SOX5_cluster: chr12:22920003-24691414
External links:
CONDOR database:CRCNE00010378; CRCNE00010377;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr1:68007518-68008027        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr6:144251534-144252037   Identity: 97.03%    E-value: 3.6e-113   Bit-score: 414.1
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_12:349109-349617   Identity: 99.61%    E-value: 2.3e-107   Bit-score: 394.9

Opossum (monDom5):
Region #1:   chr8:94818700-94819205   Identity: 98.43%    E-value: 1.1e-104   Bit-score: 386.3
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra90:574090-574597   Identity: 97.24%    E-value: 8.3e-119   Bit-score: 432.4
This UCNE has 2 paralogous regions in Platypus

Zebra_finch (taeGut1):
Region #1:   chr1A:60240463-60240971   Identity: 98.82%    E-value: 1.1e-113   Bit-score: 414.7
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr5:7643899-7644405   Identity: 96.85%    E-value: 9.3e-112   Bit-score: 408.8
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584680:3476320-3476827   Identity: 98.62%    E-value: 6.2e-115   Bit-score: 419.9
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL173761:43336-43814   Identity: 95.41%    E-value: 1.3e-95   Bit-score: 354.9
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:280868853-280869359   Identity: 74.66%    E-value: 6.8e-64   Bit-score: 244.2
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr23:573955-574422   Identity: 78.04%    E-value: 1.9e-62   Bit-score: 239.5
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrIV:21396884-21397359   Identity: 75.89%    E-value: 2.3e-61   Bit-score: 236
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr19:6184469-6184963   Identity: 73.59%    E-value: 3.3e-58   Bit-score: 225.3
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr4:16139119-16139610   Identity: 73.28%    E-value: 1.1e-50   Bit-score: 201.3
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):