UCNE: SOX5_Ryan
(id = 9751)

General information about the entry
Entry location:UTR
Position:chr12:24291951-24292505
Length:555 nt
Sequence:SOX5_Ryan.fasta
Overlapping gene:SOX5
Paralogs:chr11:16461799-16461965: SOX6_Ryan;
Ultraconserved Genomic Regulatory Block (UGRB): SOX5_cluster: chr12:22920003-24691414
External links:
CONDOR database:CRCNE00010376; CRCNE00010375; CRCNE00010374;
VISTA Enhancer Browser:hs233;
UCE (Bejerano et al. 2004):uc.336 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr1:67917771-67918339        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr6:144367717-144368266   Identity: 95.09%    E-value: 2.9e-107   Bit-score: 394.6
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_2721:66881-67435   Identity: 99.28%    E-value: 6.1e-103   Bit-score: 380.4
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr8:94605335-94605888   Identity: 97.84%    E-value: 3.5e-100   Bit-score: 371.5
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra343:20693-21253   Identity: 96.08%    E-value: 1.9e-116   Bit-score: 424.7
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr1A:60167178-60167732   Identity: 96.94%    E-value: 9.9e-112   Bit-score: 408.3
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr5:7746804-7747367   Identity: 92.02%    E-value: 3.6e-112   Bit-score: 410.3
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584680:3378068-3378196   Identity: 98.45%    E-value: 2.1e-19   Bit-score: 102.7
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL173556:130774-131298   Identity: 75%    E-value: 1.8e-50   Bit-score: 205.1

Fugu (fr2):
Region #1:   chrUn:280853852-280854196   Identity: 70.49%    E-value: 2.3e-32   Bit-score: 139.6
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr23:616724-617143   Identity: 69.09%    E-value: 2.4e-34   Bit-score: 146.2
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrIV:21415719-21416075   Identity: 73.17%    E-value: 1.3e-36   Bit-score: 153.9
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr19:6199789-6200195   Identity: 66.59%    E-value: 1.5e-28   Bit-score: 126.9
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr4:16175862-16176194   Identity: 83.83%    E-value: 4.6e-42   Bit-score: 172.7
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):