ChIP-seq against 20 histone lysine and arginine methylations, one histone variant (H2A.Z), RNA polymerase II (Pol II) and the insulator binding protein CTCF in human CD4+ T cells. Chromatin digested with micrococcal nuclease(MNase).
ChIP-seq data:
| Filename | Description | Feature | GEO-ID | |
| 1 | CTCF.sga | CD4+ T cell|CTCF | CTCF | - |
| 2 | H2AZ.sga | CD4+ T cell|H2AZ (MNase) | H2AZ | - |
| 3 | H2BK5me1.sga | CD4+ T|H2BK5me1 (MNase) | H2BK5me1 | - |
| 4 | H3K27me1.sga | CD4+ T|H3K27me1 (MNase) | H3K27me1 | - |
| 5 | H3K27me2.sga | CD4+ T|H3K27me2 (MNase) | H3K27me2 | - |
| 6 | H3K27me3.sga | CD4+ T|H3K27me3 (MNase) | H3K27me3 | - |
| 7 | H3K36me1.sga | CD4+ T|H3K36me1 (MNase) | H3K36me1 | - |
| 8 | H3K36me3.sga | CD4+ T|H3K36me3 (MNase) | H3K36me3 | - |
| 9 | H3K4me1.sga | CD4+ T|H3K4me1 (MNase) | H3K4me1 | - |
| 10 | H3K4me2.sga | CD4+ T|H3K4me2 (Mnase) | H3K4me2 | - |
| 11 | H3K4me3.sga | CD4+ T|H3K4me3 (MNase) | H3K4me3 | - |
| 12 | H3K79me1.sga | CD4+ T|H3K79me1 (MNase) | H3K79me1 | - |
| 13 | H3K79me2.sga | CD4+ T|H3K79me2 (MNase) | H3K79me2 | - |
| 14 | H3K79me3.sga | CD4+ T|H3K79me3 (MNase) | H3K79me3 | - |
| 15 | H3K9me1.sga | CD4+ T|H3K9me1 (MNase) | H3K9me1 | - |
| 16 | H3K9me2.sga | CD4+ T|H3K9me2 (MNase) | H3K9me2 | - |
| 17 | H3K9me3.sga | CD4+ T|H3K9me3 (MNase) | H3K9me3 | - |
| 18 | H3R2me1.sga | CD4+ T|H3R2me1 (MNase) | H3R2me1 | - |
| 19 | H3R2me2.sga | CD4+ T|H3R2me2 (MNase) | H3R2me2 | - |
| 20 | H4K20me1.sga | CD4+ T|H4K20me1 (MNase) | H4K20me1 | - |
| 21 | H4K20me3.sga | CD4+ T|H4K20me3 (MNase) | H4K20me3 | - |
| 22 | H4R3me2.sga | CD4+ T|H4R3me2 (MNase) | H4R3me2 | - |
| 23 | PolII.sga | CD4+ T|PolII | PolII | - |
| 24 | all_histones.sga | CD4+ T cell|all histones||merged | histones | - |
All samples have been merged except CTCF and PolII to generate the all_histones sample.
SGA conversion was carried out using bed2sga.pl (ChIP-seq).
WIG files are available at:
https://epd.expasy.org/chipseq/chip_seq_wig.html