Genome-wide tag scanner

Target Databases

Transcriptomes (RefSeq):
Query Sequence
Enter Sequence in text window below (max 60 nt)

Upload text File containing one query sequence per line

      exact       one mismatch       two mismatches      

Background: TagScan allows searching for matches or near-exact matches between oligonucleotide queries of up to 60 bases and sequence databases comprising entire genomes or mRNA reference sequences. The smallest query allowed is 10 nucleotides long.

Last update 15 June 2012